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JMP > Multivariate Analysis > Correlation> How to Handle Large Datasets?

Hi JMP Community, I need to assess the correlation between ~10,500 biomarkers measured in 150 patients at baseline. I tried a simple JSL script based on the fit Y by X and the Multivariate Correlation platform. Both approaches take a long time to compute on my machine (Windows 10 Pro, Intel i-7 2.50 GHz, 32 GB RAM, JMP 16). Is there a faster approach to generate and retrieve Pearson's r and associ...
Thierry_S

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Oct 10, 2022 12:58 PM

1833 views | 5 replies
How do I change the Local Data Filter conditional order within Graph Builder

Good day: I'll see if I can clearly state my question. I have a plot created via Graph Builder in JMP v 14.1. I've added a Local Data Filter (with 9 variables) so I can visualize certain subset(s) of the data. I've chosen the "conditional" option in the Local data Filter as well. So far, so good. But, I'm struggling to see how the conditional ordering can be changed. I see that I can re-orde...
MRB3855

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Oct 10, 2022 12:45 PM

11533 views | 10 replies
How to solve program errors——Limit Column Detect( 1 )

我的程序本来是正常的，只是花费时间比较大多，大概两分钟运行时间。为了节省时间，我将Limit Column Detect( 0 )改为Limit Column Detect( 1 ),程序就出错了，算的值和原来不一样，请问如何避免。
lehaofeng

Discussions |
Oct 10, 2022 11:00 AM

2875 views | 5 replies
How to run analysis of 1 binomial data set and 1 nominal data set.

Hi everyone, This is my first post here as I am very new to JMP pro. I am a novice at stats and could use some guidance. I have a data set where 1 column is tree type (lets say type 1, 2, or 3) and the other column is binomial (1,0) dead or alive. I am trying to get the statistical significance for the difference in average % mortality by tree type. Basically I need the hard stats to explain the f...
Braydon12

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Oct 10, 2022 9:31 AM

5806 views | 11 replies
Regression Question

I have a randomized complete block design. I have 2 treatments (A and B). I have 3 blocks of each treatment (A1, A2, A3 and B1, B2, B3). Within each block I have 15 plots. Within the 15 plots I collected data each time I found one of 3 different types of bushes (M, E, and R) in my plots. I need to run an analysis that will tell me if treatments A and B have a significantly different number of Bush...
Braydon12

Discussions |
Oct 10, 2022 9:29 AM

1313 views | 3 replies

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Latest Discussions

Regression Question

I have a randomized complete block design. I have 2 treatments (A and B). I have 3 blocks of each treatment (A1, A2, A3 and B1, B2, B3). Within each block I have 15 plots. Within the 15 plots I collected data each time I found one of 3 different types of bushes (M, E, and R) in my plots. I need to run an analysis that will tell me if treatments A and B have a significantly different number of Bush...
Braydon12

Discussions |
Oct 10, 2022 9:29 AM

1313 views | 3 replies
Analysis of split plot DOE results

In analysis of a (split) split plot REML as well as Generalized regression is used, which anaysis method is preferred?
frankderuyck

Discussions |
Oct 10, 2022 9:18 AM

1776 views | 4 replies
Map Shapes Not Found In Graph Builder ( Great Britain)

I use Graph Builder quite a bit to demonstrate where my JMP users are based in the world. We can automatically pick up where they are based via a Smartsheet ( https://www.smartsheet.com/) but one of the annoyances is that Smartsheet calls the UK Great Britain which JMP doesn't recognize. This means that i have to change these manually each time to run the report, I realize I could have a script to...
d_barnett

Discussions |
Oct 10, 2022 8:44 AM

2672 views | 5 replies
JMP12 vs JMP14 close command while saving

Hello, I've recently moved to JMP14 and have some scripts that stop working due to "invalid argument in access or evaluation of 'Close'". Basically in JMP12 if I wanted to close table ABC and save it as a csv file, I'd use the following command:close(data table ("ABC") << save("\C:\Temp\ABC.csv"));In JMP14, I cannot do this anymore. Does anyone know what would be the equivalent to this command in ...
godfeatha

Discussions |
Oct 10, 2022 8:31 AM

1254 views | 2 replies
Problem to transfer continuous data from excel to jmp

Dear community experts, I try to import the dataset with continuous data (factor6, 7, 8, 9, 12, 13,15 and everything beyond fifteen are responses) from JMP to excel. After export I cannot change the data type to continuous, its not available. I already changed everything to number formate and it didnt help.Its irritating for me also, that all the responses are continuous, even they come from the s...
SimonFuchs

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Oct 10, 2022 6:52 AM

1723 views | 1 replies

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Model classification thresholds add-in display "negative" probability

Hi, I've been looking at this add-in which is very useful.https://community.jmp.com/t5/JMP-Add-Ins/Exploring-Model-Classification-Thresholds/ta-p/66964 In our case we don't have a probability but instead we have a status and a measurement that ranges between -10 and 10.I want to adapt the script so that the slider can move between -10 and 10 (I've already done it and it works). However the "Probab...
Agustin

Discussions |
Sep 13, 2022 6:43 AM

592 views | 0 replies
wrap: hide sub-titles?

In GRaph Builder, "wrap" is a nice option to split a data set into small pieces and generate many sub-plots.
But sometimes, the window is just filles with the "titles" of the sub-plots an there is no space left for the plots.
Is there an option to hide the titles of the subplots?
In the "wrap" context menu, there is an option to remove the "title" (here: "data"), but not the sub-titles.
And in the red...
hogi

Discussions |
Sep 11, 2022 8:53 AM

629 views | 0 replies
How to transform least square means from Turkey table after box cox transformation

Hello Everyone, I am running a three-way ANOVA with data expressed in percentage, but the data set is not normal. Since I have zeros, I first add a constant 0.00001, then I fit the model, and in the least square fit window, I used the box cox transformation to do a better fit. I know if I ask to save the predicted values, it will save the back-transformed data, but is there an option for JMP to sa...
Viniaze

Discussions |
Aug 27, 2022 9:14 AM

669 views | 0 replies
XGBoost Add-In for JMP Pro no test set result in model screening

I'm using model screening and include XGBoost as a method. However the result from XGBoost are only shown in Train set and Validation set.Why the result of XGBoost for test set is not shown?
TasapornV

Discussions |
Aug 25, 2022 12:45 AM

737 views | 0 replies
JMP Pro, Dantzig selector: how do I improve computational time

Hello JMP community members. Concerning the use of the Dantzig selector on big and sparse datasets.I wondered what features would be at disposal to tune the computational time.Right now it takes about 40 minutes to get a result back for a problem with 380 rows and 149 non-singular parameters. This makes me wonder about the options available to tweak the computation time. I was thinking about redu...
Not_A_Student

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Aug 12, 2022 7:49 AM

738 views | 0 replies