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Try the Materials Informatics Toolkit, which is designed to easily handle SMILES data. This and other helpful add-ins are available in the JMP® Marketplace

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Learning Resources

Latest Discussions

Latest Discussions

Latest Discussions

  • How do I get the partial eta squared for a model with random effects?

    Hello, I am conducting a two-way ANOVA with a random effect and need to report the partial eta squared. Does anyone know how to do this or calculate it from values displayed in the output? I tried the add-on but it does not support models with random effects. For the model I have a dependent variable and my model effects looks like:variable1variable2variable1*variable2variable3 & random all variab...

    ELM890 ELM890
    Discussions |
    Jul 2, 2024 9:53 AM
    513 views | 0 replies
  • Hyperparameters and neural network architecture

    Hello,I'm trying to reproduce the results obtained on JMP with the "Neural" model by adding nested cross-validation, which is not possible on the software. However, the architecture is very unclear and I can't understand the calculations performed by the model. I don't have access to certain information such as batch size, optimizer used, loss, learning rate (except the one for the boosting), and ...

    Grizzly Grizzly
    Discussions |
    Jul 2, 2024 5:42 AM
    412 views | 0 replies
  • Questions about Calculating Confidence Intervals in "Agreement within Raters" - Attributive Analyses

    Hello everyone, I am currently analyzing "Agreement within Raters" and would like to better understand how these confidence intervals are calculated. My main questions are:What steps or methods are used to calculate confidence intervals in "Agreement within Raters" of Attributive analyses?Which statistical distribution is typically used for these calculations? Could anyone recommend some literatur...

    DToniato DToniato
    Discussions |
    Jun 26, 2024 6:03 AM
    472 views | 0 replies
  • Creating a biomarker combination variable

    Hi. I want to analyze how well two biomarkers work together in the detection of diseased from healthy and compare the combination to the single markers. I have previously done such analysis in SPSS using binary logistic regression and then simply running ROC-analysis for single markers and combination. With JMP I cannot find how to combine two biomarkers using a logistic regression analysis. Could...

    kahuhti kahuhti
    Discussions |
    Jun 25, 2024 11:56 PM
    454 views | 0 replies
  • Q-K mixed model using plink files

    Hello,Please I need help to run Q-K mixed model analysis. I have flat and binary plink files. I tried to generate a .sas7bdat file with letters in genotypes. I tried to run a kinship matrix but it didn't look good (a lot of empty boxes/ In genotype columns, non empty boxes have 1/1 as a value). When I try to run any analysis, I got errors. I recoded genotypes in my raw files to 0, 1 and 2 but stil...

    Imane-Morjane Imane-Morjane
    Discussions |
    Jun 24, 2024 11:41 PM
    346 views | 0 replies
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