I must be missing something. In your document, the circled bar is from 1.0 to 1.1 and has a total of 11%.
In the last picture, the JMP graph as a bar from 1.0 to 1.05 with a height of 5% and another bar from 1.05 to 1.1 with a height of 6%. 5% + 6% = 11%. As for the counts, they appear to be 5005+ 5640 = 10645/98968 = 10.756%. That matches with the rounding that Jim described.
The difference that I see is that in one graph you have bars taking a width of 0.1, while in the other the bar width is 0.05.
Dan Obermiller