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Try the Materials Informatics Toolkit, which is designed to easily handle SMILES data. This and other helpful add-ins are available in the JMP® Marketplace

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Learning Resources

Latest Discussions

  • Generating a Recode Column script...

    I am running multiple analyses for different tables. Each table has a column for diagnosis and there are over 900 different types of diagnosis. SO what I do is recode column and then reclassify each diagnosis into 40 "diagnostic classes". However this is a tedious process repeating the recoding of the diagnoses column for each table. Need help creating a recode script that captures the logic for g...

    DrMoka DrMoka
    Discussions |
    Feb 17, 2019 4:30 AM
    8342 views | 2 replies
  • How to CORRECTLY name a table?

    All, I know how to set a name to a table. But sometimes, if that name already exists (by chance or from left after previous runs of the script), the name instead of setting ot "My Table" would set to is "My Table 2". How do I correctly set it to exactly what I want it to be set to?I'm looking for a snippet of code that does this - checks if table with this name exasts, if yes, closes or renames ol...

    miguello miguello
    Discussions |
    Feb 15, 2019 2:06 PM
    7716 views | 5 replies
  • Find rows that contains specific text

    All, I got stuck on a seemingly easy step. My table is compiled from multiple CSV files. Where those files were previously concatenated, there is one service row that is empty except first three columns where it says something like "### Switching Logging: datetime" in the first column and then from which file in second coumn and to what file in third column. So, a trash row that I want to delete. ...

    miguello miguello
    Discussions |
    Feb 15, 2019 2:01 PM
    9963 views | 6 replies
  • ROC curve, probability , cut off

    Hi, How do I find the cut off value from the probaility on the ROC. I had to adjust to get a better AUC. Thanks

    Cartica Cartica
    Discussions |
    Feb 15, 2019 6:54 AM
    5766 views | 2 replies
  • Transpose header data and concatenate files

    I have a set of raw data csv files with metadata in the header that I want to concatenate and copy the header data into columns. I have been able to modify the "combine txt tables.jsl" script I found on this site to pull in the header data, transpose it and join it to the raw data table. The header data is contained within each raw data file on rows 2 through 29, and I transpose it to make the fir...

    mlipsitz mlipsitz
    Discussions |
    Feb 15, 2019 5:13 AM
    23626 views | 6 replies

Latest Discussions

  • Generating a Recode Column script...

    I am running multiple analyses for different tables. Each table has a column for diagnosis and there are over 900 different types of diagnosis. SO what I do is recode column and then reclassify each diagnosis into 40 "diagnostic classes". However this is a tedious process repeating the recoding of the diagnoses column for each table. Need help creating a recode script that captures the logic for g...

    DrMoka DrMoka
    Discussions |
    Feb 17, 2019 4:30 AM
    8342 views | 2 replies
  • ROC curve, probability , cut off

    Hi, How do I find the cut off value from the probaility on the ROC. I had to adjust to get a better AUC. Thanks

    Cartica Cartica
    Discussions |
    Feb 15, 2019 6:54 AM
    5766 views | 2 replies
  • how to remove moving range, limits and center line in control chart by JSL?

    For example, I have a table: T A B1 7 2
    3 3 1
    5 5 3and would like to plot 2 control chart on A and B vs T with some specs: :A<<Set Property( "Spec Limits", {LSL( 2 ), USL( 9 ), Target( 5.5 )} );
    :B<<Set Property( "Spec Limits", {LSL( 0 ), USL( 2 ), Target( 4 )} );
    dt=Current Data Table();
    dt<< Control Chart Builder(
    Variables(
    Y(:A,:B),
    Subgroup(T)
    )
    ); Here what I get: How I can delect the moving range par...

    jasongao jasongao
    Discussions |
    Feb 14, 2019 11:22 AM
    6081 views | 4 replies
  • Add replicates of the same level for a DOE that include the quadratic

    Hi, I want to create a DOE that will include replicates of the same level and that the model has interactions as well as quadratic for 4 factors out of 5. The reason why is that each run, you can obtain 3 independent results. I just want to know if with this approach the number of run will be n/3 becuase I will obtain 3 results in 1 run. Thank you, Vanessa

    var3 var3
    Discussions |
    Feb 14, 2019 8:45 AM
    4803 views | 7 replies
  • Variability plot legend not linking to data table

    I've been having an intermitant problem with adding legends to variability plots. Typically, before I plot I will assign row colors and markers within the data table. Then I make my varibility plot and add a row legend. I want it to use the marker and color assignments I've already added in my table, so I select "None" under Colors and Markers. Some of the times it does exactly what I want it to d...

    Splicegirl43 Splicegirl43
    Discussions |
    Feb 14, 2019 3:13 AM
    2794 views | 1 replies

Latest Discussions

  • Beta Generalized Regression and adjusted chi-square values

    I have a data set from a two-choice rodent feeding trial. We were testing the effectiveness of 10 deterrents by coating them on seeds and offering them to rodents alongside control seeds that were uncoated. The explanatory variable is which of the 10 deterrents the treatment seed was coated with, and the response variable is the proportion of control seed and treatment seed consumed.  The question...

    Mananahi Mananahi
    Discussions |
    Feb 13, 2019 9:58 AM
    1964 views | 0 replies
  • DF Dens for repeated measures ANOVAs

    Dear JMP Community, When I run repeated measures ANOVAs with JMP (RMS, with Subject as a random factor), I have noticed that when a certain factor is crossed with Subject, the corresponding DF Den stays independent while the DF Dens for the other factors are put together as “Residual”.  Please see Images 1-3 of the attached file on how “DF Den” under “Test Denominator Synthesis” change across imag...

    mu mu
    Discussions |
    Feb 6, 2019 8:10 AM
    3269 views | 0 replies
  • Partition and Pruning

    I'm working with a dataset of about 27,000 rows and am trying to use 9 factors to predict a response using the partition function and a decision tree.  I'm using both k-means and validation.  When I tell JMP to Go, it will split 100-200 times, however the Split History shows me very little improvement after about 20 splits. For what I'm trying to do, I want to back up to the 20th split, but I don'...

    NG NG
    Discussions |
    Jan 30, 2019 8:25 AM
    2939 views | 0 replies
  • I want to use LASSO and Group LASSO in JMP

    I'm involved in a project where we are applying lasso to build a logistic regression model from a "black box" set of predictors.  I need to get JMP Pro before trying out JMP's implementation.  I'm doing all the analysis in R at present.  Does JMP Pro also include group lasso?  I've found through using JMP Cluster Variables (CLUSVAR) that I can naturally group my predictors prior to group lasso.  F...

    gene gene
    Discussions |
    Nov 2, 2018 7:43 AM
    2226 views | 0 replies
  • Contingency table and mosaic plot are not same orientation

    // For a contingency table report, swap the x and y // currently can swap the mosaic plot only Names Default to Here(1); dt = Open( "$SAMPLE_DATA/Big Class.jmp" ); myr = Contingency( Y( :Age ), X( :sex ) ); // Have to have a Contingency Analysis report open // Can add test to make sure it is open in the future myr = Current Report(); // taking apart CrossTabBox was easier using XML than JSL ...

    Vball247 Vball247
    Discussions |
    Oct 29, 2018 2:18 PM
    2921 views | 0 replies
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