cancel
Showing results for 
Show  only  | Search instead for 
Did you mean: 
Try the Materials Informatics Toolkit, which is designed to easily handle SMILES data. This and other helpful add-ins are available in the JMP® Marketplace
Choose Language Hide Translation Bar
kvnsngr
Level I

Smallest Covering Circle

I have a need to determine the smallest circle covering a group of 10 points (specifically the diameter of said circle). Does anyone have an idea of how I can calculate this in JSL?

1 ACCEPTED SOLUTION

Accepted Solutions
Craige_Hales
Super User

Re: Smallest Covering Circle

Don't know how to calculate an exact answer, but this seems to iterate to an approximation. 

Update, 15feb2019 - this does not work well if there are only two points on the circle, see picture at end.

 

see slightly better JSL below

Circle shrunk to fit the pointsCircle shrunk to fit the points

Here's the two point case that is not going to work well:

can't find the center very well with only two pointscan't find the center very well with only two points

You could test for that and take the average of those two points when the third nearest point isn't at the radius, but that is getting clumsy and might have more issues. If you need an exact answer, you should look into the wikipedia answer. https://en.wikipedia.org/wiki/Smallest-circle_problem 

might be hard... https://stackoverflow.com/questions/33443006/understanding-algorithm-for-finding-the-smallest-circle... 

 

This is a little better, but the Welzl algorithm should give exact answers in less time:

points = J( 33, 2, Random normal( 50, 20 ) ); // make 33 random points

nrows = N Rows( points );

kdt = KDTable( points ); // make a nearest row look up table

center = Mean( points[0, 1] ) || Mean( points[0, 2] ); // pick a starting point
radius = 1e99; // make it big enough 
fraction = .2; // fractional distance to move the center towards farthest point
For( i = 1, i < 1000, i++, // usually stops around 700
	{indexes, distances} = kdt << knearestrows( nrows, center ); // just need farthest point, but get them all

	farthest = indexes[nrows]; // last one is far away
	howfar = distances[nrows];
	If( howfar > radius, // if oscillating, make the fraction smaller
		fraction = fraction * .9; // .5 stops the iterations too soon and gives really poor answers for 2-points on circle case
		Show( i, fraction );
		If( fraction < 1e-15, // good enough
			Break()
		);
	);
	radius = howfar; 
	// move slightly toward the farthest point
	center = center + fraction * (points[farthest, 0] - center);

);


New Window( "Example",
	Graph Box(
		Frame Size( 500, 500 ),
		X Scale( -30, 130 ),
		Y Scale( -30, 130 ),
		Marker( Marker State( 3 ), points[0, 2], points[0, 1] );
		Pen Color( "Blue" );
		Circle( {center[2], center[1]}, radius );
		fill Color( "red" );
		Pen Color( "red" );
		Circle( {center[2], center[1]}, 2.0,"FILL" );
		for(i=nrows,i>nrows-3,i--,
			for(j=i,j>nrows-3,j--,
				line({points[indexes[i],2],points[indexes[i],1]},{points[indexes[j],2],points[indexes[j],1]})
			)
			
		);
	)
);

center is closercenter is closer

Craige

View solution in original post

6 REPLIES 6
uday_guntupalli
Level VIII

Re: Smallest Covering Circle

@kvnsngr , 
          Are you referring to the smallest enclosing circle problem. If yes, do you have an algorithm in mind that you want to implement in JMP ?

 

 

Best
Uday
kvnsngr
Level I

Re: Smallest Covering Circle

Forgive me, I'm not very informed on the topic. But I found a paper by Sven Skyum that seemed to have an effcient algorithm. 

uday_guntupalli
Level VIII

Re: Smallest Covering Circle

@kvnsngr , 
   Well I really want to help you, however I would recommend and request that you try and at least come up with  good pseudo code on what you would like the community to help with. If you could come up with a pseudo code, I or other community members can lead the way on how to achieve the pseudocode in JMP. 

 

Best
Uday
Craige_Hales
Super User

Re: Smallest Covering Circle

Don't know how to calculate an exact answer, but this seems to iterate to an approximation. 

Update, 15feb2019 - this does not work well if there are only two points on the circle, see picture at end.

 

see slightly better JSL below

Circle shrunk to fit the pointsCircle shrunk to fit the points

Here's the two point case that is not going to work well:

can't find the center very well with only two pointscan't find the center very well with only two points

You could test for that and take the average of those two points when the third nearest point isn't at the radius, but that is getting clumsy and might have more issues. If you need an exact answer, you should look into the wikipedia answer. https://en.wikipedia.org/wiki/Smallest-circle_problem 

might be hard... https://stackoverflow.com/questions/33443006/understanding-algorithm-for-finding-the-smallest-circle... 

 

This is a little better, but the Welzl algorithm should give exact answers in less time:

points = J( 33, 2, Random normal( 50, 20 ) ); // make 33 random points

nrows = N Rows( points );

kdt = KDTable( points ); // make a nearest row look up table

center = Mean( points[0, 1] ) || Mean( points[0, 2] ); // pick a starting point
radius = 1e99; // make it big enough 
fraction = .2; // fractional distance to move the center towards farthest point
For( i = 1, i < 1000, i++, // usually stops around 700
	{indexes, distances} = kdt << knearestrows( nrows, center ); // just need farthest point, but get them all

	farthest = indexes[nrows]; // last one is far away
	howfar = distances[nrows];
	If( howfar > radius, // if oscillating, make the fraction smaller
		fraction = fraction * .9; // .5 stops the iterations too soon and gives really poor answers for 2-points on circle case
		Show( i, fraction );
		If( fraction < 1e-15, // good enough
			Break()
		);
	);
	radius = howfar; 
	// move slightly toward the farthest point
	center = center + fraction * (points[farthest, 0] - center);

);


New Window( "Example",
	Graph Box(
		Frame Size( 500, 500 ),
		X Scale( -30, 130 ),
		Y Scale( -30, 130 ),
		Marker( Marker State( 3 ), points[0, 2], points[0, 1] );
		Pen Color( "Blue" );
		Circle( {center[2], center[1]}, radius );
		fill Color( "red" );
		Pen Color( "red" );
		Circle( {center[2], center[1]}, 2.0,"FILL" );
		for(i=nrows,i>nrows-3,i--,
			for(j=i,j>nrows-3,j--,
				line({points[indexes[i],2],points[indexes[i],1]},{points[indexes[j],2],points[indexes[j],1]})
			)
			
		);
	)
);

center is closercenter is closer

Craige
Craige_Hales
Super User

Re: Smallest Covering Circle

Best description I found: https://www.nayuki.io/page/smallest-enclosing-circle with implementations in several languages and a live demo on the page.

Craige
kvnsngr
Level I

Re: Smallest Covering Circle

Thanks a lot for the insight! I haven't fully implimented this yet but it seems like this might work for me.