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How to export JMP results (i.e. least square mean table from least square regression) to excel ?


Community Member


May 18, 2016

I have used JMP to perform least square regression analysis and tried to export least square mean table to excel or txt formats for additional analyses. I can copy to the least square mean table and then "select" table and copy columns to excel files manually. However, I have more than 100 least square mean table in an analyses. Manually doing this doesn't seem to be a good idea. I have checked the "JMP help" and it said to save "report" go to "file", "save as", then save it. However, I cannot find the "file", "save as" on the report window.





Jun 23, 2011

The best way to do this will depend on how your data is organised, since when 'pointing and clicking', one hundred is a large number.

To see an example, do 'File > New > New Script', cut and paste the code directly below into the window that appears, then do 'Edit > Run Script':


dt = Open("$SAMPLE_DATA/Big");

fm = dt << Fit Model(

Y( :height ),

Effects( :age ),

By( :sex ),

Personality( "Standard Least Squares" ),

Emphasis( "Effect Leverage" ),



(This is just to make a sample report from some data).

Using the 'By' variable gives an analysis for each level of that variable. If you now go to the report, and right click on one of the 'Least Squares Means Tables' you can select 'Make Combined Data Table' to make a new JMP table, that you can export to Excel if you want to. Note that, even if you had 1,000 levels ini the 'By' variable, you only have to click once. If needed, you could use JSL to automate the whole analysis.

(I am also just a little curious as to what you need to do in Excel that you feel you currently can't in JMP).


Community Trekker


Apr 15, 2013

From your screen-dump it looks like you have the menus and toolbars hidden. If you hover above the bluish line below the window top-bar it should appear. Or you could set your preferences (File->Preferences->Windows Specific->Auto-hide menu and toolbars (set it to "Never")). This should allow you to access File->Save As... And save as .txt.

Hope it helps.




Jun 23, 2011

I notice that your response is 'fold change.' I take it that you are measuring the titer of an antibody, or something like that. Your regression analysis will probably improve if you transform the response with a logarithm. It doesn't matter which base you use as far as the improvement because that will only affect the scale but you might use base 2. It will be more meaningful because you think in terms of 'doubling.'