Here are my thoughts:
There are two fundamental reasons why we are continuously "optimizing":
1. We never start with all. The factors we study is always a small subset of all of the factors. Decisions get made as to what to include (or not) in initial studies. This is most often a function of intuition, gut feel, experience, collaboration. It is interesting to note, investigators will drop factors from the study with no data. What happens to these factors in subsequent studies?
2. New or alternative applications of materials/technologies are constantly being invented.
I think your proposal misses some important elements of investigation that are not necessarily DOE related, but greatly improve the use of experimentation. For example, directed sampling to understand which components of variation (sets of x's) have the greatest leverage, provide an assessment of stability and evaluate measurement uncertainty. Iteration is the key to developing a thorough understanding (cycles of induction-deduction). I also believe typical investigators don't include noise in their experimental strategies sufficiently to assess whether the model will have consistent "performance" over further conditions. There is a huge bias on developing optimal strategies for the design factors and very little on noise strategies.
"All models are wrong, some are useful" G.E.P. Box