Hi everyone,
first of all, excuse my english because I am not a native english speaker. I am a beginner in the field of design of experimens and this is why I am looking for insights. My problem is the folowing:
1. I need to optimize the concentration of 7 proteins contained in the cell culture medium we use
2. We know that all these 7 proteins have an significant effect on the response ( yield)
3. We don't know if there is any interaction between the proteins
4. We know that the effect of some proteins is not linear to the concentration: this means that higher concentration than usual can have a negative impact on the yield ( possible quadratic effect )
5. We also know that the cells used as starting material for cell culture have a big impact on the yield, but since we can't control that factor, we are thinking about using it as a blocking factor.
My questions are the following :
- How do we start ? do we evaluate the blocking factor in the first plan we make ?
- Do we need to use three level per factor ( concentration of protein) or two to reduce the number of assay ( but we could miss quadratic effect)
Thank you in advance.