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    <title>topic Regarding Summary Plots and Missing Values in Principal Components Analysis in Discussions</title>
    <link>https://community.jmp.com/t5/Discussions/Regarding-Summary-Plots-and-Missing-Values-in-Principal/m-p/898193#M105807</link>
    <description>&lt;P&gt;&lt;SPAN&gt;I have some questions about the summary plot in principal components calculation. &lt;/SPAN&gt;&lt;/P&gt;
&lt;P&gt;&lt;SPAN&gt;The figure below shows the principal components results of the big class dataset for weight and height.&lt;/SPAN&gt;&lt;/P&gt;
&lt;P&gt;&lt;span class="lia-inline-image-display-wrapper lia-image-align-inline" image-alt="BabyDoragon_0-1756723987115.png" style="width: 400px;"&gt;&lt;img src="https://community.jmp.com/t5/image/serverpage/image-id/81714i74A7DC4B72EB8FB9/image-size/medium?v=v2&amp;amp;px=400" role="button" title="BabyDoragon_0-1756723987115.png" alt="BabyDoragon_0-1756723987115.png" /&gt;&lt;/span&gt;&lt;/P&gt;
&lt;P&gt;&amp;nbsp;&lt;/P&gt;
&lt;P&gt;&lt;SPAN&gt;However, I don’t understand the mathematical meaning of the plot on the right. Weight point lies in the first quadrant—what does this imply? Also, what does the radius length represent? &lt;/SPAN&gt;&lt;/P&gt;
&lt;P&gt;&amp;nbsp;&lt;/P&gt;
&lt;P&gt;&lt;SPAN&gt;Additionally, the figure below shows results for another dataset.&lt;/SPAN&gt;&lt;/P&gt;
&lt;P&gt;&lt;span class="lia-inline-image-display-wrapper lia-image-align-inline" image-alt="BabyDoragon_1-1756724049449.png" style="width: 400px;"&gt;&lt;img src="https://community.jmp.com/t5/image/serverpage/image-id/81715i1B1FFD0E057446FE/image-size/medium?v=v2&amp;amp;px=400" role="button" title="BabyDoragon_1-1756724049449.png" alt="BabyDoragon_1-1756724049449.png" /&gt;&lt;/span&gt;&lt;/P&gt;
&lt;P&gt;&amp;nbsp;&lt;/P&gt;
&lt;P&gt;&lt;SPAN&gt;Under what circumstances can a summary plot be drawn, but when saving the principal components, both prin1 and prin2 are entirely missing values? What does this indicate? I cannot understand why prin1 describes 18.9% of the data and prin2 describes 13.6%, yet when saving the principal components, the data for them are completely empty&lt;/SPAN&gt;&lt;SPAN&gt;.&lt;/SPAN&gt;&lt;/P&gt;
&lt;P&gt;&lt;span class="lia-inline-image-display-wrapper lia-image-align-inline" image-alt="BabyDoragon_2-1756724090911.png" style="width: 400px;"&gt;&lt;img src="https://community.jmp.com/t5/image/serverpage/image-id/81716i2C448B0D74082468/image-size/medium?v=v2&amp;amp;px=400" role="button" title="BabyDoragon_2-1756724090911.png" alt="BabyDoragon_2-1756724090911.png" /&gt;&lt;/span&gt;&lt;/P&gt;
&lt;P&gt;&amp;nbsp;&lt;/P&gt;</description>
    <pubDate>Mon, 01 Sep 2025 10:55:58 GMT</pubDate>
    <dc:creator>BabyDoragon</dc:creator>
    <dc:date>2025-09-01T10:55:58Z</dc:date>
    <item>
      <title>Regarding Summary Plots and Missing Values in Principal Components Analysis</title>
      <link>https://community.jmp.com/t5/Discussions/Regarding-Summary-Plots-and-Missing-Values-in-Principal/m-p/898193#M105807</link>
      <description>&lt;P&gt;&lt;SPAN&gt;I have some questions about the summary plot in principal components calculation. &lt;/SPAN&gt;&lt;/P&gt;
&lt;P&gt;&lt;SPAN&gt;The figure below shows the principal components results of the big class dataset for weight and height.&lt;/SPAN&gt;&lt;/P&gt;
&lt;P&gt;&lt;span class="lia-inline-image-display-wrapper lia-image-align-inline" image-alt="BabyDoragon_0-1756723987115.png" style="width: 400px;"&gt;&lt;img src="https://community.jmp.com/t5/image/serverpage/image-id/81714i74A7DC4B72EB8FB9/image-size/medium?v=v2&amp;amp;px=400" role="button" title="BabyDoragon_0-1756723987115.png" alt="BabyDoragon_0-1756723987115.png" /&gt;&lt;/span&gt;&lt;/P&gt;
&lt;P&gt;&amp;nbsp;&lt;/P&gt;
&lt;P&gt;&lt;SPAN&gt;However, I don’t understand the mathematical meaning of the plot on the right. Weight point lies in the first quadrant—what does this imply? Also, what does the radius length represent? &lt;/SPAN&gt;&lt;/P&gt;
&lt;P&gt;&amp;nbsp;&lt;/P&gt;
&lt;P&gt;&lt;SPAN&gt;Additionally, the figure below shows results for another dataset.&lt;/SPAN&gt;&lt;/P&gt;
&lt;P&gt;&lt;span class="lia-inline-image-display-wrapper lia-image-align-inline" image-alt="BabyDoragon_1-1756724049449.png" style="width: 400px;"&gt;&lt;img src="https://community.jmp.com/t5/image/serverpage/image-id/81715i1B1FFD0E057446FE/image-size/medium?v=v2&amp;amp;px=400" role="button" title="BabyDoragon_1-1756724049449.png" alt="BabyDoragon_1-1756724049449.png" /&gt;&lt;/span&gt;&lt;/P&gt;
&lt;P&gt;&amp;nbsp;&lt;/P&gt;
&lt;P&gt;&lt;SPAN&gt;Under what circumstances can a summary plot be drawn, but when saving the principal components, both prin1 and prin2 are entirely missing values? What does this indicate? I cannot understand why prin1 describes 18.9% of the data and prin2 describes 13.6%, yet when saving the principal components, the data for them are completely empty&lt;/SPAN&gt;&lt;SPAN&gt;.&lt;/SPAN&gt;&lt;/P&gt;
&lt;P&gt;&lt;span class="lia-inline-image-display-wrapper lia-image-align-inline" image-alt="BabyDoragon_2-1756724090911.png" style="width: 400px;"&gt;&lt;img src="https://community.jmp.com/t5/image/serverpage/image-id/81716i2C448B0D74082468/image-size/medium?v=v2&amp;amp;px=400" role="button" title="BabyDoragon_2-1756724090911.png" alt="BabyDoragon_2-1756724090911.png" /&gt;&lt;/span&gt;&lt;/P&gt;
&lt;P&gt;&amp;nbsp;&lt;/P&gt;</description>
      <pubDate>Mon, 01 Sep 2025 10:55:58 GMT</pubDate>
      <guid>https://community.jmp.com/t5/Discussions/Regarding-Summary-Plots-and-Missing-Values-in-Principal/m-p/898193#M105807</guid>
      <dc:creator>BabyDoragon</dc:creator>
      <dc:date>2025-09-01T10:55:58Z</dc:date>
    </item>
    <item>
      <title>Re: Regarding Summary Plots and Missing Values in Principal Components Analysis</title>
      <link>https://community.jmp.com/t5/Discussions/Regarding-Summary-Plots-and-Missing-Values-in-Principal/m-p/898203#M105808</link>
      <description>&lt;P&gt;&lt;A href="https://www.jmp.com/support/help/en/18.2/#page/jmp/principal-components-report.shtml#" target="_blank" rel="noopener"&gt; Multivariate Methods &amp;gt; Principal Components &amp;gt; Principal Components Report&lt;/A&gt;&amp;nbsp;&lt;/P&gt;
&lt;P class="body"&gt;The Loadings Plot graphs the unrotated loading matrix between the variables and the components. The closer the value is to 1, the greater the effect of the component on the variable.&lt;/P&gt;</description>
      <pubDate>Mon, 01 Sep 2025 11:10:07 GMT</pubDate>
      <guid>https://community.jmp.com/t5/Discussions/Regarding-Summary-Plots-and-Missing-Values-in-Principal/m-p/898203#M105808</guid>
      <dc:creator>jthi</dc:creator>
      <dc:date>2025-09-01T11:10:07Z</dc:date>
    </item>
    <item>
      <title>Re: Regarding Summary Plots and Missing Values in Principal Components Analysis</title>
      <link>https://community.jmp.com/t5/Discussions/Regarding-Summary-Plots-and-Missing-Values-in-Principal/m-p/898589#M105847</link>
      <description>&lt;P&gt;&lt;SPAN&gt;Under what circumstances would summary plots be able to display the illustrations for component 1 and 2, but the 'save column' for 'save principal component value' is completely empty?&lt;/SPAN&gt;&lt;/P&gt;
&lt;P&gt;&amp;nbsp;&lt;/P&gt;
&lt;P&gt;&lt;span class="lia-inline-image-display-wrapper lia-image-align-inline" image-alt="BabyDoragon_0-1756951799962.png" style="width: 400px;"&gt;&lt;img src="https://community.jmp.com/t5/image/serverpage/image-id/81849iE3F771CDF7B4CA2B/image-size/medium?v=v2&amp;amp;px=400" role="button" title="BabyDoragon_0-1756951799962.png" alt="BabyDoragon_0-1756951799962.png" /&gt;&lt;/span&gt;&amp;nbsp;&amp;nbsp;&lt;/P&gt;
&lt;P&gt;&lt;span class="lia-inline-image-display-wrapper lia-image-align-inline" image-alt="BabyDoragon_1-1756951820682.png" style="width: 400px;"&gt;&lt;img src="https://community.jmp.com/t5/image/serverpage/image-id/81850i413CF9B41B0CA9C6/image-size/medium?v=v2&amp;amp;px=400" role="button" title="BabyDoragon_1-1756951820682.png" alt="BabyDoragon_1-1756951820682.png" /&gt;&lt;/span&gt;&lt;/P&gt;
&lt;P&gt;&amp;nbsp;&lt;/P&gt;
&lt;P&gt;&amp;nbsp;&lt;/P&gt;</description>
      <pubDate>Thu, 04 Sep 2025 02:10:37 GMT</pubDate>
      <guid>https://community.jmp.com/t5/Discussions/Regarding-Summary-Plots-and-Missing-Values-in-Principal/m-p/898589#M105847</guid>
      <dc:creator>BabyDoragon</dc:creator>
      <dc:date>2025-09-04T02:10:37Z</dc:date>
    </item>
    <item>
      <title>Re: Regarding Summary Plots and Missing Values in Principal Components Analysis</title>
      <link>https://community.jmp.com/t5/Discussions/Regarding-Summary-Plots-and-Missing-Values-in-Principal/m-p/898601#M105848</link>
      <description>&lt;P&gt;For example when you have missing values&lt;/P&gt;
&lt;P&gt;&lt;span class="lia-inline-image-display-wrapper lia-image-align-inline" image-alt="jthi_0-1756959424154.png" style="width: 400px;"&gt;&lt;img src="https://community.jmp.com/t5/image/serverpage/image-id/81861iA6A97F18450B06D2/image-size/medium?v=v2&amp;amp;px=400" role="button" title="jthi_0-1756959424154.png" alt="jthi_0-1756959424154.png" /&gt;&lt;/span&gt;&lt;/P&gt;
&lt;P&gt;&amp;nbsp;&lt;/P&gt;</description>
      <pubDate>Thu, 04 Sep 2025 04:17:13 GMT</pubDate>
      <guid>https://community.jmp.com/t5/Discussions/Regarding-Summary-Plots-and-Missing-Values-in-Principal/m-p/898601#M105848</guid>
      <dc:creator>jthi</dc:creator>
      <dc:date>2025-09-04T04:17:13Z</dc:date>
    </item>
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