add_drop {onemap} | R Documentation |
Creates a new sequence by adding or dropping markers from a predetermined one. The markers are added in the end of the sequence.
add.marker(input.seq, mrks) drop.marker(input.seq, mrks)
input.seq |
an object of class |
mrks |
a vector containing the markers to be added or removed from
the |
An object of class sequence
, which is a list containing the
following components:
seq.num |
a |
seq.phases |
a |
seq.rf |
a |
seq.like |
log-likelihood of the corresponding linkage map. |
data.name |
name of the object of class |
twopt |
name of the object of class |
Marcelo Mollinari, mmollina@usp.br
data(example.out) twopt <- rf.2pts(example.out) all.mark <- make.seq(twopt,"all") groups <- group(all.mark) (LG1 <- make.seq(groups,1)) (LG.aug<-add.marker(LG1, c(4,7))) (LG.red<-drop.marker(LG1, c(1,2,3,5,6)))